CDS

Accession Number TCMCG017C27779
gbkey CDS
Protein Id OMO66789.1
Location complement(join(17015..17191,17313..17442,17698..17804,18487..18580,18664..18860,19350..19421,19581..19695,20065..20181,20290..20381,20477..20653,20769..20843,20934..21074,21420..21608,21697..21762,21869..22019,22355..22423,22808..22956,23046..23177,23278..23603,23726..23762,24763..24817,24912..24973,25094..25114,25494..25496))
GeneID InterPro:IPR001680
Organism Corchorus olitorius
locus_tag COLO4_30357

Protein

Length 917aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01020723.1
Definition hypothetical protein COLO4_30357 [Corchorus olitorius]
Locus_tag COLO4_30357

EGGNOG-MAPPER Annotation

COG_category U
Description The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
ko04147        [VIEW IN KEGG]
KEGG_ko ko:K17302        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005794        [VIEW IN EMBL-EBI]
GO:0005798        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0006888        [VIEW IN EMBL-EBI]
GO:0006890        [VIEW IN EMBL-EBI]
GO:0006891        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0012506        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016192        [VIEW IN EMBL-EBI]
GO:0030117        [VIEW IN EMBL-EBI]
GO:0030120        [VIEW IN EMBL-EBI]
GO:0030126        [VIEW IN EMBL-EBI]
GO:0030135        [VIEW IN EMBL-EBI]
GO:0030137        [VIEW IN EMBL-EBI]
GO:0030659        [VIEW IN EMBL-EBI]
GO:0030660        [VIEW IN EMBL-EBI]
GO:0030662        [VIEW IN EMBL-EBI]
GO:0030663        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0031410        [VIEW IN EMBL-EBI]
GO:0031982        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044431        [VIEW IN EMBL-EBI]
GO:0044433        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0048193        [VIEW IN EMBL-EBI]
GO:0048475        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0097708        [VIEW IN EMBL-EBI]
GO:0098588        [VIEW IN EMBL-EBI]
GO:0098796        [VIEW IN EMBL-EBI]
GO:0098805        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCCACTCAGACTCGAAATTAAGAGGAAACTTGCTCAAAGGTCAGAGAGAGTAAAATCTACGGATCTCCATCCAACAGAACCATGGATTCTAGCAAGTTTGTATTCTGGAACTGTGTGTATCTGGAACTACCAGTCACAGACAATGGCTAAATCATTCGAGGTCACTGAGTTGCCAGTTAGGTCAGCCAAGTTTGTTGCACGCAAACAATGGGTTGTTGCCGGAGCTGATGACATGTTTATTCGTGTATACAATTACAATACCATGGACAAGGTCAAAGTATTCGAGGCACATACTGATTACATCAGATGTGTGGCTGTCCACCCTACTCTTCCTTATGTGTTGTCATCATCTGATGATATGCTTATAAAACTTTGGGACTGGGAGAAGGGTTGGGTGTGTACTCAGATATTTGAGGGGCATTCCCATTATGTCATGCAAGTGACCTTTAATCCCAAAGACACTAACACTTTTGCCAGTGCATCTCTTGACCGTACCATTAAGATTTGGAACCTTGGCTCCCCCGACCCAAACTTTACTTTGGATGCCCATCAGAAAGGTGTAAATTGTGTTGATTACTTTACAGGTGGTGATAAGCCTTATCTAATCACCGGTTCTGATGATCACACTGCTAAGGTATGGGACTACCAAACCAAGAGTTGTGTTCAGACGTTGGAAGGCCACACACACAATGTTTCTGCAGTGTGTTTCCATCCTGAACTTCCAATTATCATTACTGGTTCTGAGGATGGCACAGTTCGTATCTGGCATGCCACCACTTATAGGCTTGAAAATACATTGAACTATGGCCTTGAGAGAGTTTGGGCAATTGGATATATTAAAGGTTCACGCAGGATTGTTATTGGGTACGATGAAGGAACTATTATGGTGAAAATTGGCCGTGAAGTTCCTGTAGCCAGCATGGACAACAGTGGGAAAATCATATGGGCTAAGCACAATGAAATTCAGACTGTGAACATTAAGAGTGTAGGAGCTGATTTTGAGGTCACTGATGGAGAAAGATTGCCCTTGGCTGTTAAGGAATTGGGGACCTGTGATCTATACCCTCAAAGCTTAAAGCATAATCCAAATGGGAGGTTTGTTGTTGTCTGTGGAGATGGCGAGTACATCATATATACAGCTTTGGCATGGAGAAATAGGTCCTTTGGTTCAGCATTGGAATTCGTTTGGTCATCTGATGGAGAGTATGCTGTCAGGGAAAGTTCATCAAAAATTAAGATTTTCAGCAAAAACTTCCAGGAAAAGAGGAGTGTCCGACCAACCTTCTCTGCTGAGCGTATTTTCGGGGGAACTTTATTGGCAATGTGCTCAAATGATTTTATTTGTTTTTACGATTGGGCTGAATGCAGGTTGATTCGTCGAATTGATGTTACTGTGAAAAATCTCTACTGGGCTGATAGTGGTGACTTGGTGGCAATTGCGAGTGATTCGTCTTTTTACATCCTAAAGTACAATAGGGATGTTGTTCAATCTTACTTAGATAGTGGAAGACCTGTTGATGAACAAGGAGTTGAAGATGCATTTGAGCTTCTTCATGAAACCAATGAACGTGTCAGGACTGGCATATGGGTTGGGGACTGTTTTATTTACAATAACTCTTCATGGAGACTTAATTACTGTGTTGGTGGAGAGGTAACCACAATGTTTCATTTGGACCGTCCTATGTACTTGTTGGGATATCTTGCAAGTCAAAGTCGGGTGTATCTGATTGACAAAGAGTTTAATGTTATGGGATACACATTACTACTCAGTTTGATTGAGTACAAGACTCTTGTGATGCGTGGAGACTTGGAAAGGGCCAATGAAATTTTACCTTCAATTCCTAAAGAACACCATAATAGTGTGGCTCGTTTCCTGGAATCTCGAGGCATGATAGAGGATGCTCTAGAAGTAGCCACAGACCCTGATTACAGATTTGAGCTTGCCATTCAACTTGGTAAATTAGATATTGCAAAGGAAATAGCTACAGAAGTTCAGAGTGAGTCTAAATGGAAGCAGTTAGGAGAATTGGCTATGTCCACTGGAAAGCTAGAAATGGCCGAGGAATGCATGAAGCATGCTATGGACTTAAGTGGTTTATTGCTGCTTTATTCCTCTTTGGGAGATGCAGAAGGGATATCAAGACTTGCATCCCTTTCTAAAGAGCAAGGGAAAAACAATGTTGCTTTCCTTTGCTTATTCATGTTAGGTAAATTGGAGGAGTGCCTTCAGCTTTTGGTGGAAAGCAATCGGATACCAGAGGCTGCTCTGATGGCGCGATCTTATCTTCCCAGCAAGGTTTCAGAGATAGTCGCTATTTGGAGAAAAGACCTGAACAAGGTTAATCCAAAAGCTGCTGAATCTTTGGCTGACCCTGAAGAGTATTCCAACTTGTTTGAGGATTGGCAAGTTGCTCTTTCAGTTGAATCTAAAGCAGCAGAGACAAGGGGTGTTTATCCTCCTGCTGCGGACTATTTGAACCATGCTGATAGAACGCAGATGACACTTGTTGAAGCTTTTAGAAACATGCAAATAGAGGAAGAGGAGCCTCTTGAAAATGGTGAACTTGACCATGAGGCTGCAGAACCAAATGGACATGACCAGGATGCAGAGGAGGAGCAGAATGGAGAAGATGGTAGCCAAGAGGAGGCTGTTGTTGTCGATGCTGATTCGAACGATGGTGCAGTACTCGTTAACGGTAACGAGCATGAAGAAGAGTGGGGTACGAATAAAGAAGGAACCCCGTCAGCCTAA
Protein:  
MPLRLEIKRKLAQRSERVKSTDLHPTEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWVCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKGSRRIVIGYDEGTIMVKIGREVPVASMDNSGKIIWAKHNEIQTVNIKSVGADFEVTDGERLPLAVKELGTCDLYPQSLKHNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSSDGEYAVRESSSKIKIFSKNFQEKRSVRPTFSAERIFGGTLLAMCSNDFICFYDWAECRLIRRIDVTVKNLYWADSGDLVAIASDSSFYILKYNRDVVQSYLDSGRPVDEQGVEDAFELLHETNERVRTGIWVGDCFIYNNSSWRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLVMRGDLERANEILPSIPKEHHNSVARFLESRGMIEDALEVATDPDYRFELAIQLGKLDIAKEIATEVQSESKWKQLGELAMSTGKLEMAEECMKHAMDLSGLLLLYSSLGDAEGISRLASLSKEQGKNNVAFLCLFMLGKLEECLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRKDLNKVNPKAAESLADPEEYSNLFEDWQVALSVESKAAETRGVYPPAADYLNHADRTQMTLVEAFRNMQIEEEEPLENGELDHEAAEPNGHDQDAEEEQNGEDGSQEEAVVVDADSNDGAVLVNGNEHEEEWGTNKEGTPSA